Projects

Data Analysis

  • Ubspec Processing ubspec-processing

    Python package for processing raw UBSpec traces

  • VisualPhenomics 5 visualphenomics5.0

    Tools for processing raw DEBI chamber images

  • phenozip

    Tool for combining and converting DEPI datasets. Provides user interface and JS script builder/enterpreter.

  • O.L.I.V.E.R. oliver

    Interactive tool for exploring data. (Observe, Link, Integrate, Verify, Explore, Reveal)

  • caapp-qtl

    Python package for conveniently connecting CAAPP data with qtl tools (reformats qtl analysis inputs/outputs)

Data Capture

  • W.I.L.L.I.A.M. william

    Control software for plant bio reactors. Modularized for a large variety of hardware setups.

  • Gel Scanner gel-scanner

    Gel Scanner software and hardware

Global Tools

Projects used in facilitation of other projects.